Note: These plugins can be downloaded using the Plugin Manager in Savant. To access the Plugin Manager, click Plugins > Plugin Manager.
Name | Description |
1000 Genomes | Load 1000 Genomes alignment tracks |
Aberrant Splice Modelling | Performs modelling and visualization of splice junctions |
Chromatogram | Shows sequencing chromatograms atop reference genome |
edgeR | Detects and visualizes differential enrichment from RNA-seq or ChIP-seq data |
Data Table | Shows textual data from track records in tabular form |
Export | Exports screenshots of all bookmarked locations |
GATK | Predicts and visualizes genotypes from read alignment tracks |
Gene Ontology | Guides navigation based on ontology terms |
iReckon | Reconstructs and estimates isoforms from RNA-seq data |
PING | Guides navigation based on protein-protein interaction databases |
Remote Commander | Issue navigation and other commands remotely through external tools |
Ribosome | Shows the amino acid translation of gene tracks |
SimpleSNP | Predicts and visualizes SNVs from read alignment tracks |
Snapshot | Exports track images at every bookmarked genomic region |
SRMA | Realigns HTS read alignments |
UCSC Explorer | Provides a graphical interface for loading UCSC tracks |
WikiPathways | Guides navigation based on biological pathways |